CoEvoKG is introduced, a framework that turns a knowledge graph into both a source of verifiable training tasks and a persistent evidence memory for agent evolution, closing the loop between model self evolution and knowledge accumulation.
Zhaoyang Li, Zenghuang Fu, Qiuyuan Ai et al.· 0 citations
ProphDR is an interpretable deep learning framework that integrates multiomics data and drug structural information using a hierarchical attention mechanism, and generates biologically interpretable attention maps that highlight key pharmacophores and resistance-related genes consistent with established mechanisms in NSCLC and BRCA.
Yundian Zeng, Qing Ye, Jike Wang et al.· Journal of Chemical Informat...· 0 citations
This study presents three advanced machine learning models: the evolutionary Gaussian process inference model, the artificial satellite search algorithm–moment balance machine (ASSA-MBM), and the Operation Rain Forest (ORF), which are designed to predict the maximum reinforcement load in geosynthetic-reinforced soil structures. These models were developed to enhance both predictive accuracy and model interpretability by incorporating state-of-the-art optimization algorithms and explainable machine learning frameworks. A comprehensive evaluation was conducted using 10-fold cross-validation, and the proposed models were benchmarked against previously developed AI models from literature, as well as traditional and semiempirical approaches such as Rankine, Coulomb, and
K
-stiffness. Among the proposed models, ASSA-MBM consistently achieved the best performance, recording the lowest testing root mean squared error (0.617), the highest correlation coefficient (
R
=
0.918
), and the highest reference index (
RI
=
0.951
). Additionally, the ORF model offers transparency by generating mathematical regression equations, which are crucial in geotechnical engineering.
Min-Yuan Cheng, Akhmad F. K. Khitam, Jia-Wang Liou· Journal of computing in civi...· 0 citations
The first comprehensive benchmarking framework specifically designed to accommodate inter-dataset heterogeneity is presented, finding that well-designed small datasets can match or even surpass the performance of larger benchmarks, suggesting that different metrics are applicable to different datasets/testing scenarios.
Yingjuan Cheng, Qing Ye, Linlong Jiang et al.· Journal of Cheminformatics· 0 citations
A novel committor learning framework grounded in the AlphaFold 3 paradigm is proposed that elucidates how ligand substituents regulate the ratio between distinct binding pathways, offering new perspectives for structure-based drug design.
Jintu Zhang, Zichang Jin, Huifeng Zhao et al.· 0 citations
The Comprehensive VS Platform with AI Engine (CVSP-AIE) for drug discovery from compound libraries integrates three AI models: KarmaDock, a fast docking model that directly updates atomic coordinates; CarsiDock, an accurate docking model that predicts protein-ligand distances and reconstructs binding poses; and RTMScore, an accurate scoring model that learns residue-atom distance distributions for affinity prediction.
A new machine-learning framework aims to improve the success rate of computational protein design while moving away from results that reproduce sequences found in nature.
MIT News · Artificial Intelligence· news.mit.eduAug 24, 2026
A new method for surgically removing training examples from a model reveals that as datasets grow, the link between what a model learns and what it produces dissolves.