A critical synthesis of recent advances in pigment regulation is presented, moving beyond descriptive gene lists to examine the mechanistic underpinnings of pigment regulation and provides a foundation for rational manipulation of fruit coloration and nutritional quality.
Abstract
ABSTRACT Anthocyanin accumulation in Rosaceae fruits is governed by a multi‐layered regulatory network integrating transcriptional control, epigenetic modulation, environmental signaling, and metabolic flux allocation. This review presents a critical synthesis of recent advances in this field, moving beyond descriptive gene lists to examine the mechanistic underpinnings of pigment regulation. We first outline the core biosynthetic pathway and post‐synthetic modifications that ensure pigment stability. The central focus is on the MYB–bHLH–WD40 transcriptional complex and its integration with epigenetic mechanisms (DNA methylation, histone modifications, non‐coding RNAs) and post‐transcriptional regulation. We further examine how environmental cues—light, temperature, and hormones—are transduced through these molecular networks, and analyze metabolic flux control at pathway branch points. A cross‐species comparative perspective across major Rosaceae crops (Malus, Pyrus, Fragaria, Prunus) reveals conserved regulatory nodes and genus‐specific innovations. Finally, we discuss how this integrated knowledge, combined with multi‐omics and gene editing tools, is driving targeted strategies in molecular breeding and postharvest quality management. This framework provides a foundation for rational manipulation of fruit coloration and nutritional quality.
The intricate crosstalk between GA and other hormonal pathways, particularly jasmonic acid and Strigolactone, revealing how these interactions fine‑tune anthocyanin production is explored and how GA signaling integrates environmental cues to coordinate anthocyanin levels in apple is explored.
This review examines how miRNAs compartment-specific regulate ROS metabolism in the apoplast, mitochondria, and chloroplasts, and delineates the multi-layered control of miRNA biogenesis by ROS, encompassing redox-sensitive transcription factors, epigenetic modifications, and post-translational modifications.
Jing Wang, Huai-Qing Hao, Ying-Yue Wen et al.· Plant physiology and biochem...· 0 citations
DNA methylation acts not only as a plant epigenetic clock, but also as an important regulatory mechanism during leaf senescence, fruit ripening, and chronological aging, and how hormonal and environmental cues interact with age pathways to modulate metabolic outputs is examined.
Xinyi Wang, Jing-Yu Wang, Jia-Shu Li et al.· Horticulture Research· 0 citations
This review examines the bidirectional interactions between epigenetic mechanisms and ROS homeostasis in plant stress adaptation, with a particular emphasis on drought resistance, and proposes that these interactions take the form of dynamic regulatory networks rather than one-way pathways.
N. Bhanbhro, Q. Bakhsh, Shengdixin Shi et al.· Theoretical and Applied Gene...· 1 citation
Fruit quality is a complex trait shaped by developmental programs, metabolic networks, and environmental responses; yet, the RNA-level regulatory processes that determine functional outputs remain insufficiently integrated and underexplored. In this review, we provide an integrated overview of RNA-mediated regulatory m...
Ren-Kun Tang, Meng Zhang, Kuo Chen et al.· Journal of Integrative Plant...· 0 citations