A generalizable model for the maturation of the complex is proposed, alongside a model for supercomplex formation that supports the cooperative assembly model, and the central role of cryo-EM is showcased in the study of assembly mechanism of protein complexes.
The results define the dynamic architecture of the Rixosome and provide a structural framework for ITS2 processing during nuclear maturation of the eukaryotic 60S ribosomal subunit.
M. Thoms, Jing-Yi Zhu, Xia-Ying Hong et al.· bioRxiv· 0 citations
The solution structure of mature Saccharomyces cerevisiae Mba1 is determined using multidimensional nuclear magnetic resonance (NMR) spectroscopy and reveals a compact α + β fold with a central hydrophobic cavity and distinct charged surface regions, providing a structural framework for interpreting previous functional...
Jing Yang, Mao-Sen Ruan, Dong-Shuai Bai et al.· Journal of Structural Biolog...· 0 citations
A simple, quick, and reproducible protocol for reconstituting respiratory SCs into liposomes that allows for testing the effects of varying lipid compositions, protein concentration, and membrane potential on the function of respiratory SCs, providing a valuable tool for future mechanistic studies.
A. Padavannil, Pei-Yi Liu, J. Letts· Journal of Visualized Experi...· 0 citations
An updated model for how the rixosome integrates its diverse enzymatic activities to regulate ITS2 processing is established and the human 5'-3' exoribonuclease XRN2 directly associates with RNase PNK and selectively degrades NOL9-phosphorylated RNA in vitro, thereby linking ITS2 processing by the rixosome to processiv...
Jacob Gordon, Savannah M. Seely, Huan-Chen Wang et al.· Nucleic Acids Research· 0 citations
It is found that the MI is critical for both recruitment and activation of ALAS by S. cerevisiae ClpX, and can serve both to recruit a substrate to mitochondrial ClpX and to accelerate its processing by the AAA+ motor.
Adam DeCosta, Rebekah Barrick, J. Kardon· Journal of Biological Chemis...· 0 citations
Molecular dynamics simulations use molecular dynamics simulations to investigate the differences in hydrogen-bonding interactions and conformational motions between the preturnover and midturnover states and provide insights into the critical role of conformational motions and flexibility in regulating PCET reactions a...
Matthew Tremblay, Sharon Hammes-Schiffer· Biochemistry· 0 citations
We use cookies to run the site and, with your consent, for analytics and to show ads.
See our Cookie Policy.